IF the CTBUH is consistent, and adheres to their own guidelines, the spire will be counted towards the final height.
From their web site:
http://www.ctbuh.org/TallBuildings/HeightStatistics/Criteria/tabid/446/language/en-US/Default.aspx
1. Height to Architectural Top
Height is measured from the level1 of the lowest, significant,2 open-air,3 pedestrian4 entrance to the architectural top of the building, including spires, but not including antennae, signage, flag poles or other functional-technical equipment.5
Footnote 5. Functional-technical equipment: this is intended to recognize that functional-technical equipment is subject to removal/addition/change as per prevalent technologies, as is often seen in tall buildings (e.g., antennae, signage, wind turbines, etc. are periodically added, shortened, lengthened, removed and/or replaced).
So, the spire is not an antenna...it does not radiate electromagnetic energy, though other antennae may indeed be installed upon it. It does not meet the stated definition of Functional-technical equipment.
It is permanently affixed to the structure as a guyed mast.
If they are consistent with their own standards, the spire will be counted.