The Altamont option makes the most sense, starting with the Dumbarton and maybe eventually a new transbay tunnel (how stupid the new Bay Bridge can't support rail) from Oakland. San Jose is a glorified suburb, Oakland/Berkeley will be a greater trip generator imo as those are actually cities. SJ will have two good options in BART to Fremont or upgraded Caltrain to RWC. Oakland/Berkeley will have BART to Fremont until the new Transbay is ready.
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And here the air that I breathe isn't dead.
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